CONNECTED – a new network to tackle vector-borne crop disease in Africa

 

Last week I was immersed in the world of African crop diseases, specifically the vector-borne kind, as part of the launch of CONNECTED. For those, like me, who aren’t an expert in the field – vector-borne diseases are those which are carried around by an organism (like a fly or insect) from one plant to the next.

This major new network brings together UK scientists with colleagues from across Africa to co-produce innovative new solutions to vector-borne crop diseases. And it turns out, there are a lot of them.

Africa has over 100 years of history with plant viral diseases. In 1894 cassava mosaic disease hit, followed by maize streak virus in 1901, and cassava brown streak in 1936.  Each had caused devastation, and in many cases, death.

Standing in the room and listening to presentations led by our African colleagues, there was a clear desire to work together – across disciplines and continents – to make a significant and lasting impact on crop disease reduction in Africa.

In this blog, I share just a handful of the things I learnt, alongside my thoughts for CONNECTED’s role in innovating for the future.

What are the challenges?

Almost every major crop in Africa is affected by disease

Yams, cassava, boy bean, cocoa, maize, coffee, bananas and many more of Africa’s key crops are affected by vector-borne disease.

That creates an ENORMOUS burden for the continent. Estimates shared by Prof Emmanuel Okogbenin suggest that yield losses due to plant disease cost $30 billion annually. In addition, it seriously affects food security and malnutrition in a continent where around 160 million of its population are already deemed food insecure.

As a result, demand is outstripping production for many crops (like maize), and Africa is heavily reliant on imported goods. These are undoubtedly more expensive than locally grown produce, and remain inaccessible or affordable to many.

Crucially, people have died as a result of every major outbreak.

When disease hits, it can cause severe losses

Sweet potato virus disease (SPVD) can lead to a 70-100% yield loss in infected plants.  The level of loss greatly exacerbates the issues described above.

So which crops are the most important ones to protect?

Well, it depends how you ask the question. 500 million people depend on cassava as a staple crop, and 158 million tons are produced in Africa by smallholders.

By contrast, 54 million tonnes of yam is produced annually, but 95% of this is produced in what is known as the ‘yam belt’, meaning it is considered critical in those regions. It also draws a value of c. $13.5M.

But it was clear from discussions today that we need to move beyond this idea of protecting a single crop. It turns out to be a lot more complicated than that.

In many cases, it’s not a simple case of a single vector and a single virus causing a single disease

Disease spread is highly complex. A single vector can carry many types of virus, and many viruses can be transmitted by multiple vectors. Additionally, some viruses affect a number of crops. This means it’s extremely difficult to know which vector/ virus to focus on tackling, or which crop to focus on treating, if you want to make a difference.

Perhaps surprisingly, some diseases only appear to ‘present’ when multiple viruses affect the same plant. In fact, around 69% of diseases in yams appear to be caused by 2 or more viral infections occurring at the same time.

To top it off, the vectors can often live on a number of different host plant species. This means that even if you create a crop that is resistant to a particular virus, it may still be present and spread between other plants.

And there are lots of vectors, spreading lots of diseases

Today I heard about so many vectors and viruses it’s impossible to name them all. However, here are just a few key examples that were covered by experts in the room:

  • Vectors: white fly, Aphids, leafhoppers, plant hoppers, mealybugs (my favourite, based purely on the name), thrips, and beetles.
  • Viruses: cassava brown streak virus, cassava mosaic virus, banana bunchy top virus, maize chlorotic mottle virus, yam mosaic virus, badnaviruses (yam, banana and coco), and legume potyviruses

Much disease is also spread by infected seed

In the case of sugarcane mosaic virus (SCMV), a large proportion of transmission is down to aphids, but an even greater proportion stems from the sharing of infected seeds. In a Q&A session on this topic, one audience member asked, ‘what’s the main barrier stopping people from using uncertified seeds?’ The answer? Cost. At present, many people buy seeds from friends, by the roadside, at local markets, or store their own supplies from year to year. These practices carry risk and whilst ‘certified’ (virus free) seeds are available, these are expensive. It was an important reminder that often, the scientific solutions are available, but there are social, political and economic factors to consider in ensuring uptake of these advances.

Over 80% of agricultural production in Sub-Saharan Africa is done by small holders

Whilst this has many benefits (people effectively have ‘control’ of their food production systems), managing disease across such a vast number of smallholder farms represents a major challenge. First and foremost – it’s difficult to engage with such a large number of individual farms to coordinate disease management strategies. Critically, it’s also difficult for smallholders to coordinate responses amongst themselves. In this context, ‘CONNECTED’ seems an entirely appropriate name for an initiative tackling this problem.

Summing up

In summary, day 2 of the CONNECTED conference helped us to share experiences, identify key challenges and research gaps, and decide where, as a network, we should best deploy our resources.

There was also a real sense that CONNECTED could bring far more than collaborative & impact-led research (though this in its own right would be exciting!). There were calls for joint databases, support with equipment purchases, training and capacity building, on-the-ground diagnostic support, e-resources, new technology development, incentivising public-private partnerships, and much, much more.

Through this network, there is great potential to forge important international collaborations and pool resources for maximum impact.

All in all, it has been incredible to see what expertise exists in both the UK and in Africa, hear about the collective ambitions of these fantastic collaborators, and begin to chart a path for CONNECTED.

I for one, am left feeling hopeful, inspired, and of course, ‘connected’.

The CONNECTED project

Our mission

Determined to fight malnutrition, poverty and food insecurity in Sub-Saharan Africa, the CONNECTED project is building a network of researchers to tackle vector-borne* plant diseases that devastate lives.

The challenges we face …

  • Established plant diseases carried by vectors* significantly limit the ability of Sub-Saharan Africa to produce sufficient staple and cash crops.
  • Limited production causes poverty, malnutrition and food insecurity, which in turn prevent economic and social development.
  • A range of new factors are set to compound the situation and raise the threat still further:
    • The emergence of new virus diseases
    • Climate change
    • A growing population
    • Resource limitations.

The solutions we are developing …

  • The CONNECTED** project is bringing together a network of world-class researchers to find and develop practical solutions to control plant disease.
  • We are pump-priming a range of innovative and potentially-transformative research activities, whose impact will be thoroughly evaluated. These research activities focus on five key areas:
    • Control strategies
    • Vector biology
    • New diseases
    • Vector / virus interactions
    • Diagnostics / surveillance / forecasting.
  • We are also providing training and capacity-building opportunities in the region during the three-year project lifespan.

And in the longer-term …

The aim is that the projects with the greatest regional impact can subsequently be grown into larger scale activities to achieve still greater bearing on the battle to control plant disease in Sub-Saharan Africa.

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This blog is written by Hayley Shaw who is the Manager of the Cabot Institute, and is a Network Advisor to the CONNECTED Network.

Notes
*A vector is a biting insect or tick that transmits a disease or parasite from one plant to another.

Is ash dieback under control?

Image by FERA

European ash tree is an important component of British woodlands. It has been stayed popular and recommended for planting due to its economic and aesthetic value, also the fact that its resistance towards grey squirrels. In UK, it has been estimated that among all the 141000ha big woodlands (>0.5ha), 5.4% of their composition is ash trees. However, since its first discovery in Poland in 1992, the ash dieback disease, caused by fungus Chalara fraxinea, has spread over the European continent and devastated ash populations in certain areas. On 19.Sep, Rob Spence for Forestry Commission came to Bristol to talk about thecurrent stage of ash dieback control in England.

Chalara fraxinea is the asexual stage of Hymenoscyphus pseudoalbidus, and also the infectious stage. Ascospores are produced from fruiting bodies on the dead branches in the litter, and can be transmitted by wind to more than 10km. Ascospores are not durable, thus its infection window is limited to summer months. The spores tend to attack the young trees due to their lower resistance to the disease, cause crown necrosis and eventually death. In mature plants, the effect of the disease is less severe. However, the disease can seriously compromise the condition of mature trees, and make them succumb to other diseases.

Source: BBC website

Current distribution of the disease in England is largely constrained in tree nurseries, except for East Anglia, where a number of cases have been reported in the wild. The prevalence of the disease in the nurseries all over the country is thought to be due to the fact that seeds are germinated outside of UK, and then saplings and young trees are imported back into UK from the continent, which may already be infected. However, the large outbreak in East Anglia is more likely attributed to extreme weather conditions which bring spores from the continent.

The control effort in southwest is focusing on confining the disease. Unlike East Anglia, the cases of ash dieback in wild are still rare. The Forestry Commission has been conducting aerial surveys to spot early infections, also, two smartphone apps, Tree Alert and OPAL can be used to take photos of suspected infected trees and send to the experts for identification. As the staff of the Forestry Commission is very limited, it becomes very unrealistic for them to come to field for most cases.

It is also worth noting that around 1-2% of the natural population is resistant against the disease. Researches are going on in The Sainsbury’s Lab and John Innes Centre in Norwich, as well as some European institutes trying to identify the resistant genes and possible approaches to deter the spread of the fungus through biological approaches. On country level, a ban has been placed on ash import from outside of the country and transfer of living ash tissues within the country, though the timber transport are still allowed as they are regarded as low risk.

In my point of view, ash dieback is well controlled at this stage. Despite the eventual widespread is inevitable, but this kind of selection bottlenecks has happened widely in nature since the evolution starts. Although there is no reason to reduce our effort in protecting ash trees, as long as we keep the genetic diversity with the susceptible populations while introducing and expanding the resistant traits within the population, the disease will be controlled in macro-scale.

This blog is written by Dan Lan, Biological Sciences, University of Bristol